CDS

Accession Number TCMCG007C32717
gbkey CDS
Protein Id XP_009145622.1
Location complement(join(20129208..20129288,20129376..20129491,20129594..20129617,20129698..20129729,20129816..20129901,20129989..20130042,20130145..20130206,20130300..20130361,20130535..20130621,20130708..20130784,20130889..20130947,20131034..20131098,20131200..20131289,20131437..20131533,20131623..20131722,20131818..20131891,20132229..20132310,20132388..20132438,20132518..20132595,20132852..20132896,20133007..20133108,20133345..20133401,20133691..20133777,20133976..20134033,20134126..20134157,20134233..20134260,20134352..20134453,20134562..20134716,20134961..20135024,20135188..20135260,20135336..20135416,20135634..20135728,20135914..20135945,20136258..20136293))
Gene LOC103869317
GeneID 103869317
Organism Brassica rapa

Protein

Length 807aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009147374.3
Definition DNA mismatch repair protein MSH5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAACTGACGAAACGGAAACCGAATCGCAGGTTTATATGGCTTGCATTCAGCACGGTCGTCGAGTTGGAGTTTCTTACTACGACTGTAGTGTACGCCAGCTTCATGTGCTTGAATTTTGGGAGGAAGATTGCTCTGATTTTACTCTGATCAATATGGTCAAATATCAAGCAAAGCCATTGGTCATTTACACAAGCACCAAAAGTGAAGATTCCTTTGTATCTGCTCTGCAGAAGAGTGATGGAACTGAAGAGGATACCATGGTGAAGCAGGTAAAGAGCTCAACATTTAGCTACGAGCAAGCGTGGCACAGGCTTGTTTATCTTCGAGTAACAGGAATGGATGAAGGGCTGAATATCAAAGAACGGGTTTGTTATCTGAGTTCAATGATGGATGTAGGCAGTGAAGTCCAAGTTCGTGTTAGTGGGGGTCTTCTTGCTATATTAGAAAGCGAACGAATTGTAGATACCCTGGAACAAAACGAATCTGGGACAGCGTCAATTGCAATTGACTCAGTCATGGAAGTACCATTGAACAAGTTTCTCAAACTTGATGCAGCTGCTCACGAGGCACTACAGATATTTCAAATAGATAAACATCCAAGCCATATGGGCATTGGCAGGGCAAAAGAAGGGTTCTCGGTGTTTGGCATGATGAATAAGTGTGCCACACCAATGGGTAGACGGCTTTTAAGAAGCTGGTTTATGAGGCCAATTCTGGATCTTGAAGTGTTAGACCGTCGTCTCAATGCTATTACCTTTTTCATATCTTCTATAGAGCTGATGACATCTTTGCGGGATACACTGAAATCTGTGAAGGACATATCCCATTTGCTCAAGAAATTCAACTCCCCGACGTCCTTGTGCACCAGTAATGATTGGACAGCTTTTATGAAGAGTATAGGTGCCCTCTTGCACGTGAATAAGATATTTGAAGTTGGAGTCTCTGAAAGTCTCCGAGAGCATATGAGACGCTTCAACTTAGACATTATTGAGAAGGCTGGCTTATGTATCAGCACAGAGCTAGATTATGTATATGAACTGGTACTTGGAGTCATTGATGTAACTAGAAGCAAAGAGAAGGGTTATCAAACATTGGTTAAAGATGGATTCTGTGCTGAGTTGGATGAGCTGAGGCAAATATACGAGGGGTTGCCGGAGTTCCTGCAAGAGGTTTCATCGATGGAGTTTGAACACTTACCTCATCTGCATAAGGAGAATCTCCCTCCTTGTATTGTCTATATTCAACAAATTGGGTACCTCATGTGTATTTTTGGAGAAAAACTTGATGAAACTGCACTTGATAGGATTAACGAATTTGAATTTGCGTTCTCTGATCTGGACGGGGAGACTCAGCGATTCTTTTATCATACTCCAAAGACAAGAGAGTTAGACAACGTGCTTGGAGATATCTACCACAAAATTTTAGATATGGAGAGAGCTATTATAAGGGACTTGCTATCGCACACACTTTTGTTCTCGGCACACCTGTTGAAGGCAGTTAATTTCGTTGCAGAACTTGATTGCATTTTATCGTTGGCTTGTGTAGCCCATCAGAATAAGTACGTAAGGCCTGTTCTGACAATGGAATCATTGCTTGATATTCGGAATGGAAGGCATGTTTTGCAGGAAATGGCAGTGGATACATTTATCCCCAACGATACTGAAATAAATGATAACGGTCGAATTCATATCATTACCGGTCCTAATTACTCAGGAAAGAGCATATATGTGAAGCAGGTGGCTTTAATTGTTTTCCTATCTCATATTGGAAGCTTTGTACCAGCAGATGCTGCAACTGTTGGTTTAACTGACAGGATCTTTTGTGCAATGGGAAGCAAGTTCATGACCGCGGAGCAATCTACATTTATGATTGATCTACATCAAGTGGGAATGATGCTAAGGCAGGCAACTTCAAGATCTCTGTGTCTCTTGGACGAGTTTGGTAAAGGCACTCTTACAGAAGATGGTATTGGCTTGCTTGGTGGGACAATTAGTCACTTTGCTTCATGTAATGAGCCACCAAGGGTTCTAGTATGCACCCACTTGACTGAACTACTTAACGAGAGCTGCTTGCCCGTTTCTGAGAAGATACGATTCTACACAATGAGCGTTCTGAGGCCAGATACAGAATCAGCAAACATGGAAGAAATTGTCTTTCTTTATCGGTTAATCCCGGGACAAACGCTGCTGAGTTACGGTCTACATTGTGCACTACTCGCTGGTGTCCCAGAGGAAGTGGTGAAGAGAGCAGCCATCGTGTTGGACGTCTTTGAGAGTAACAACAACGTGGATAAACTTAACCTTGACAACATATCGTCTCAAGATCAAGTATTCAAGGATGCTGTTGACAAGTTTATGGAGTTTGATATCAGTAAAGGTGATATCCGTGCTTTCTTTGAAGACATGTTCACTTCTTAA
Protein:  
MEETDETETESQVYMACIQHGRRVGVSYYDCSVRQLHVLEFWEEDCSDFTLINMVKYQAKPLVIYTSTKSEDSFVSALQKSDGTEEDTMVKQVKSSTFSYEQAWHRLVYLRVTGMDEGLNIKERVCYLSSMMDVGSEVQVRVSGGLLAILESERIVDTLEQNESGTASIAIDSVMEVPLNKFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAITFFISSIELMTSLRDTLKSVKDISHLLKKFNSPTSLCTSNDWTAFMKSIGALLHVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVLGVIDVTRSKEKGYQTLVKDGFCAELDELRQIYEGLPEFLQEVSSMEFEHLPHLHKENLPPCIVYIQQIGYLMCIFGEKLDETALDRINEFEFAFSDLDGETQRFFYHTPKTRELDNVLGDIYHKILDMERAIIRDLLSHTLLFSAHLLKAVNFVAELDCILSLACVAHQNKYVRPVLTMESLLDIRNGRHVLQEMAVDTFIPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFASCNEPPRVLVCTHLTELLNESCLPVSEKIRFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLAGVPEEVVKRAAIVLDVFESNNNVDKLNLDNISSQDQVFKDAVDKFMEFDISKGDIRAFFEDMFTS